STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102350770Glycerophosphodiester phosphodiesterase domain containing 3a. (321 aa)    
Predicted Functional Partners:
PLA2G4F
Phospholipase A2.
     
 0.910
LPCAT4
Lysophosphatidylcholine acyltransferase 4.
  
 
 0.908
H3AX69_LATCH
Phospholipase A(2).
     
 0.906
PLA2G1B
Phospholipase A(2).
     
 0.906
LOC102359454
Phospholipase A(2).
     
 0.906
H3BIC9_LATCH
Phospholipase A(2).
     
 0.906
LOC102351457
Retinoic acid receptor responder 3-like.
     
 0.903
LOC102352291
PA2c domain-containing protein.
    
  0.901
H3B5Q5_LATCH
Lipase_GDSL domain-containing protein.
     
 0.901
PLA2G12A
Phospholipase A2 group XIIA.
    
  0.900
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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