STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPQCarboxypeptidase Q. (472 aa)    
Predicted Functional Partners:
TXN2
Thioredoxin 2.
     
 0.660
H3B5A0_LATCH
Fibronectin type-III domain-containing protein.
    
 0.630
PM20D1
Peptidase M20 domain containing 1.
     
 0.588
LRRTM4
Leucine rich repeat transmembrane neuronal 4.
     
 0.580
MTDH
Metadherin.
   
 
 0.579
DPP3
Dipeptidyl peptidase 3; Belongs to the peptidase M49 family.
      
 0.554
BCL2L10
BCL2 like 10.
      
 0.549
SORL1
Sortilin-related receptor, L(DLR class) A repeats containing.
     
 0.529
LOC102353503
Uncharacterized protein.
     
 0.529
DOCK4
Dedicator of cytokinesis 4; Belongs to the DOCK family.
     
 0.516
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.