STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102353949Uncharacterized protein. (535 aa)    
Predicted Functional Partners:
H3AZ86_LATCH
FERM domain-containing protein.
 
  
 0.881
CSK
Tyrosine-protein kinase.
   
 0.736
MATK
Tyrosine-protein kinase.
   
 0.736
PSTPIP1
Proline-serine-threonine phosphatase interacting protein 1.
   
 
 0.695
PTPN4
PDZ domain-containing protein.
 
  
 0.677
SHC3
SHC adaptor protein 3.
    
 0.648
SHC1
SHC adaptor protein 1.
    
 0.648
ARHGEF4
Rho guanine nucleotide exchange factor 4.
      
 0.555
PSTPIP2
Proline-serine-threonine phosphatase interacting protein 2.
   
 
 0.552
CD247
CD247 molecule.
   
 0.540
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.