Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RLFRearranged L-myc fusion. (1901 aa)    
Predicted Functional Partners:
COLCA2
Uncharacterized protein.
      
 0.742
WBP1L
WW domain binding protein 1 like.
     
 0.711
KLHL7
Kelch like family member 7.
    
 0.650
UAP1
UDP-N-acetylglucosamine pyrophosphorylase 1.
      
 0.641
UFC1
Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.
      
 0.631
FAM183A
Family with sequence similarity 183 member A.
    
 
 0.617
H3AIP7_LATCH
Uncharacterized protein.
   
 0.615
C21orf91
Chromosome 21 open reading frame 91.
      
 0.579
PARG
Poly(ADP-ribose) glycohydrolase.
   
    0.571
LOC102362716
Poly (ADP-ribose) glycohydrolase, like.
   
    0.571
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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