Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPOCarboxypeptidase O. (453 aa)    
Predicted Functional Partners:
FASTKD2
FAST kinase domains 2.
      
 0.689
AGT
SERPIN domain-containing protein; Belongs to the serpin family.
   
 
 0.643
H3B0I5_LATCH
DBF4-type domain-containing protein.
   
  
 0.641
CPN1
Carboxypeptidase N subunit 1.
   
 
 0.606
OGA
O-GlcNAcase.
      
 0.591
CPE
Carboxypeptidase E.
     
 0.548
C5
Complement C5.
   
 0.474
C1QTNF4
C1q and TNF related 4.
      
 0.468
TINAGL1
Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family.
      
 0.453
CDH16
Cadherin 16, KSP-cadherin.
      
 0.452
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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