Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C18orf25Chromosome 18 open reading frame 25. (407 aa)    
Predicted Functional Partners:
LOC102350007
Small ubiquitin-related modifier.
    
 
 0.937
LOC102348027
Casein kinase 2, alpha 4 polypeptide; Belongs to the protein kinase superfamily.
    
   0.666
H3A271_LATCH
Protein kinase domain-containing protein.
    
   0.666
CSNK2A2
Casein kinase 2, alpha prime polypeptide b; Belongs to the protein kinase superfamily.
    
   0.666
PHF21A
PHD finger protein 21A.
      
 0.594
NAA25
N(alpha)-acetyltransferase 25, NatB auxiliary subunit.
      
 0.590
CREB3
cAMP responsive element binding protein 3.
    
   0.565
RHNO1
RAD9-HUS1-RAD1 interacting nuclear orphan 1.
      
 0.512
TP53BP1
Tumor protein p53 binding protein 1.
    
   0.509
FYTTD1
Forty-two-three domain containing 1.
  
     0.472
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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