STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XPNPEP3X-prolyl aminopeptidase 3. (466 aa)    
Predicted Functional Partners:
PMPCA
Peptidase, mitochondrial processing alpha subunit; Belongs to the peptidase M16 family.
   
 
 0.718
MIPEP
Mitochondrial intermediate peptidase.
   
 
 0.712
ATP23
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
      
 0.686
UQCRC1
Ubiquinol-cytochrome c reductase core protein 1.
   
 
 0.657
DNPEP
Aspartyl aminopeptidase; Belongs to the peptidase M18 family.
   
 
 0.599
OMA1
OMA1 zinc metallopeptidase.
  
  
 0.592
C1S
Complement C1s; Belongs to the peptidase S1 family.
   
 0.576
H3A0S9_LATCH
Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
      
 0.567
ANKS3
Ankyrin repeat and sterile alpha motif domain containing 3.
    
 0.562
PDF
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins; Belongs to the polypeptide deformylase family.
     
 0.517
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.