Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H3A5P2_LATCHWD_REPEATS_REGION domain-containing protein. (253 aa)    
Predicted Functional Partners:
TAF12
TATA-box binding protein associated factor 12.
   
 0.879
TAF10
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.868
TAF13
TATA-box binding protein associated factor 13.
    
 0.868
TAF9
TATA-box binding protein associated factor 9.
    
 0.868
TAF2
TATA-box binding protein associated factor 2.
    
 0.868
H3AV84_LATCH
TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.868
TAF8
TATA-box binding protein associated factor 8.
    
 0.868
TAF11
TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.868
TAF7
TATA-box binding protein associated factor 7.
    
 0.868
GTF2A2
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
    
 0.852
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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