STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102349972Uncharacterized protein. (246 aa)    
Predicted Functional Partners:
DLG2
Guanylate kinase-like domain-containing protein.
 
      0.899
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
 
 
 0.849
DLGAP1
DLG associated protein 1.
    
 0.802
GRIN2B
Glutamate ionotropic receptor NMDA type subunit 2B.
    
 0.744
GRIN2A
Glutamate ionotropic receptor NMDA type subunit 2A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
 0.725
DLGAP2
DLG associated protein 2.
   
 0.709
GPSM2
G protein signaling modulator 2, like.
    
 0.709
SHANK3
SH3 and multiple ankyrin repeat domains 3.
   
 0.670
ITSN2
Intersectin 2.
   
 0.669
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
   
 0.646
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.