STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102345552Carbonic anhydrase 15; Belongs to the alpha-carbonic anhydrase family. (307 aa)    
Predicted Functional Partners:
NXPH1
Neurexophilin; May be signaling molecules that resemble neuropeptides.
   
  
 0.653
NXPH2
Neurexophilin; May be signaling molecules that resemble neuropeptides.
   
  
 0.649
DGCR2
DiGeorge syndrome critical region gene 2.
 
    
 0.611
RPF2
Ribosome production factor 2 homolog.
   
 
 0.607
GRWD1
Glutamate rich WD repeat containing 1.
   
  
 0.511
RRS1
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.504
RPL11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.484
CA12
Carbonic anhydrase 12; Belongs to the alpha-carbonic anhydrase family.
  
  
0.463
NLE1
Notchless homolog 1.
   
  
 0.450
CA14
Carbonic anhydrase 14; Belongs to the alpha-carbonic anhydrase family.
  
  
0.450
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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