STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102361141TNF_2 domain-containing protein. (216 aa)    
Predicted Functional Partners:
TNFRSF6B
TNF receptor superfamily member 6b.
   
 0.964
FASLG
Fas ligand.
     
 
0.900
LOC102354757
Uncharacterized protein.
    
 0.546
TNFRSF25
TNF receptor superfamily member 25.
    
 0.546
PLEKHG5
Pleckstrin homology and RhoGEF domain containing G5.
    
 0.546
H3BA84_LATCH
Uncharacterized protein.
    
 0.535
LOC102356355
TNFR-Cys domain-containing protein.
    
 0.481
CD40
TNFR-Cys domain-containing protein.
   
 0.467
TNFRSF11B
TNF receptor superfamily member 11b.
   
 0.467
LTBR
Lymphotoxin beta receptor.
   
 0.467
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.