Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCOCShort coiled-coil protein. (82 aa)    
Predicted Functional Partners:
FEZ2
Fasciculation and elongation protein zeta 2.
   
 
 0.961
FEZ1
Fasciculation and elongation protein zeta 1.
   
 
 0.960
PSMC5
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
    
   0.928
ARL1
ADP ribosylation factor like GTPase 1; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.884
PRPF38B
Uncharacterized protein.
      
 0.748
DLGAP3
DLG associated protein 3.
      
 0.701
IQCJ
IQ motif containing J.
    
   0.690
SCHIP1
Schwannomin interacting protein 1.
    
   0.690
ARFRP1
ADP ribosylation factor related protein 1.
      
 0.685
PSTPIP1
Proline-serine-threonine phosphatase interacting protein 1.
      
 0.641
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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