STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCOCShort coiled-coil protein. (82 aa)    
Predicted Functional Partners:
ARL1
ADP ribosylation factor like GTPase 1; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.970
FEZ2
Fasciculation and elongation protein zeta 2.
   
 
 0.852
FEZ1
Fasciculation and elongation protein zeta 1.
   
 
 0.745
ARFRP1
ADP ribosylation factor related protein 1.
      
 0.617
WAC
WW domain containing adaptor with coiled-coil.
      
 0.610
PRPF38B
Uncharacterized protein.
      
 0.556
DLGAP3
DLG associated protein 3.
      
 0.555
KCNT2
Potassium sodium-activated channel subfamily T member 2.
      
 0.554
UNC79
Unc-79 homolog, NALCN channel complex subunit.
      
 0.554
FAM89B
Family with sequence similarity 89 member B.
      
 0.552
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.