Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC102356421ISY1 splicing factor homolog. (282 aa)    
Predicted Functional Partners:
BUD31
BUD31 homolog.
   
 0.998
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 0.997
AQR
Aquarius intron-binding spliceosomal factor.
 
  
 0.997
XAB2
XPA binding protein 2.
    
 0.996
PRPF19
Pre-mRNA processing factor 19.
    
 0.996
PPIE
Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.
   
  0.993
SNW1
SNW domain containing 1.
    
 0.991
ZNF830
zf-C2H2_jaz domain-containing protein.
    
  0.986
CDC40
Cell division cycle 40.
    
 0.983
DHX38
DEAH-box helicase 38.
    
 0.972
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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