Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMTC2Transmembrane O-mannosyltransferase targeting cadherins 2. (696 aa)    
Predicted Functional Partners:
POMT1
Protein O-mannosyltransferase 1.
      
 0.885
INTS11
Integrator complex subunit 11.
   
 0.853
INTS1
Integrator complex subunit 1.
    
 0.850
INTS10
Integrator complex subunit 10.
   
 0.844
INTS5
Integrator complex subunit 5.
    
 0.828
INTS9
Integrator complex subunit 9.
   
 0.826
INTS13
Integrator complex subunit 13.
   
 0.820
INTS3
Integrator complex subunit 3.
    
 0.789
INTS2
Integrator complex subunit 2.
   
 0.738
LGALS9
Galectin.
   
 
 0.737
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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