Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
H3A609_LATCHG_PROTEIN_RECEP_F1_2 domain-containing protein. (311 aa)    
Predicted Functional Partners:
TMEM171
Transmembrane protein 171.
      
 0.543
MANSC1
MANSC domain containing 1.
      
 0.470
EPDR1
Ependymin related 1.
      
 0.454
RETREG3
Reticulophagy regulator family member 3.
      
 0.454
FAM189A2
Family with sequence similarity 189 member A2.
   
  
 0.443
SPPL2A
Signal peptide peptidase like 2A.
      
 0.432
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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