Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DOCK9Dedicator of cytokinesis 9; Belongs to the DOCK family. (1909 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
   
 0.943
DOCK10
Dedicator of cytokinesis 10; Belongs to the DOCK family.
   
 0.705
ANKRD9
Ankyrin repeat domain 9.
   
  
 0.703
PREX1
Phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1.
   
 
 0.675
RAP1GAP
RAP1 GTPase activating protein.
      
 0.660
ARHGEF16
Rho guanine nucleotide exchange factor 16.
     
 0.657
LOC102351732
Uncharacterized protein.
   
 0.613
RAC1
Rac family small GTPase 1.
   
 0.613
RAC3
Rac family small GTPase 3.
   
 0.613
LOC102352006
Uncharacterized protein.
   
 0.613
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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