STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PER1Period circadian regulator 1. (1131 aa)    
Predicted Functional Partners:
TIMELESS
Timeless circadian regulator.
   
 0.849
CSNK1E
Casein kinase 1, epsilon; Belongs to the protein kinase superfamily.
    
 0.816
CSNK1D
Casein kinase 1 delta.
    
 0.816
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
    
0.758
CRY2
Cryptochrome circadian regulator 2.
   
 0.741
H3A8H2_LATCH
Uncharacterized protein.
    
 0.723
BHLHE41
Basic helix-loop-helix family member e41.
    
 0.718
FBXW11
F-box and WD repeat domain containing 11.
    
 0.708
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
    
0.696
CRY1
Cryptochrome circadian regulator 1.
   
 0.660
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.