Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102362273Uncharacterized protein. (385 aa)    
Predicted Functional Partners:
TNNI3
Uncharacterized protein.
   
 0.942
MYH7
Myosin heavy chain 7; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.942
MYH6
Myosin heavy chain 6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.942
TNNT2
Troponin T2, cardiac type.
   
 0.941
TPM3
Tropomyosin 3; Belongs to the tropomyosin family.
   
 0.939
TPM2
Tropomyosin 2; Belongs to the tropomyosin family.
   
 0.939
MYL3
Myosin, light chain 13.
   
 0.921
MYL2
Myosin light chain 2.
   
 0.914
LOC102364634
Uncharacterized protein.
  
  
 
0.900
ACTC1
Zgc:86709.
  
  
 
0.900
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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