Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TRPM5Transient receptor potential cation channel subfamily M member 5. (1109 aa)    
Predicted Functional Partners:
NUDT9
Nudix hydrolase 9.
 
   
  0.841
CALHM1
Calcium homeostasis modulator 1.
      
 0.769
TRPA1
Transient receptor potential cation channel subfamily A member 1; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.760
CALHM3
Calcium homeostasis modulator 3.
      
 0.691
TRPC6
Transient receptor potential cation channel subfamily C member 6; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.645
KCNJ16
Potassium voltage-gated channel subfamily J member 16.
      
 0.611
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1.
   
 
 0.578
KCNJ15
Potassium voltage-gated channel subfamily J member 15.
      
 0.548
DCLK1
Doublecortin like kinase 1; Belongs to the protein kinase superfamily.
   
  
 0.533
TAS1R3
Taste 1 receptor member 3.
      
 0.520
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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