STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GXYLT1Glucoside xylosyltransferase 1. (367 aa)    
Predicted Functional Partners:
GXYLT2
Glucoside xylosyltransferase 2.
  
  
 
0.902
ZNF462
Zinc finger protein 462.
      
 0.598
PGK1
Phosphoglycerate kinase.
      
 0.562
EXD1
Exonuclease 3'-5' domain containing 1.
      
 0.555
POGLUT1
Protein O-glucosyltransferase 1.
      
 0.552
ALG11
ALG11 alpha-1,2-mannosyltransferase.
      
 0.499
TMEM117
Transmembrane protein 117.
      
 0.472
NPAT
Nuclear protein, coactivator of histone transcription.
    
 
 0.471
ACSL3
Acyl-CoA synthetase long chain family member 3.
      
 0.470
MAP3K7
Mitogen-activated protein kinase kinase kinase 7.
      
 0.469
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.