Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H3A657_LATCHPH domain-containing protein. (1101 aa)    
Predicted Functional Partners:
PLEKHA5
Pleckstrin homology domain containing A5.
    
 0.647
NUDT3
Nudix hydrolase 3.
    
 
 0.612
TMCO3
Transmembrane and coiled-coil domains 3.
      
 0.597
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.550
LATS2
Large tumor suppressor kinase 2.
   
 0.536
LATS1
Large tumor suppressor kinase 1.
   
 0.536
LOC102346166
Ubiquitin-like domain-containing protein.
    
  0.511
RPS27A
Ribosomal protein S27a.
    
  0.511
UBE2K
Ubiquitin conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.501
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.499
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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