STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A664_LATCHUncharacterized protein. (188 aa)    
Predicted Functional Partners:
IL10RB
Uncharacterized protein.
    
 0.990
H3AF25_LATCH
Uncharacterized protein.
   
  
 0.765
IL10
Interleukin 10.
   
  
 0.717
IFNAR1
Uncharacterized protein.
    
 0.714
IL17F
Interleukin 17F.
   
  
 0.712
STAT3
Signal transducer and activator of transcription.
     
 0.600
H3A3C0_LATCH
Uncharacterized protein.
   
  
 0.571
CCR6
C-C motif chemokine receptor 6; Belongs to the G-protein coupled receptor 1 family.
      
 0.568
IL6
Uncharacterized protein.
      
 0.556
PPP1R13B
Protein phosphatase 1 regulatory subunit 13B.
    
 0.555
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.