Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102349034Deoxyribonuclease; Belongs to the DNase I family. (312 aa)    
Predicted Functional Partners:
SPCS1
Signal peptidase complex subunit 1.
    
   0.818
H2ZXN0_LATCH
Uncharacterized protein.
    
 
 0.717
SPCS2
Signal peptidase complex subunit 2.
    
 
 0.717
H2ZSF9_LATCH
Uncharacterized protein.
    
   0.569
CD93
CD93 molecule.
   
 
 0.565
SLC25A21
Solute carrier family 25 member 21; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.561
TBX20
T-box transcription factor 20.
    
   0.559
INKA2
Inka box actin regulator 2.
    
   0.515
CYB5D2
Cytochrome b5 domain containing 2; Belongs to the cytochrome b5 family.
      
 0.482
ANAPC16
Anaphase promoting complex subunit 16.
      
 0.482
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.