STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102349034Deoxyribonuclease; Belongs to the DNase I family. (312 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2a.
   
 
 0.538
RIMS2-2
Regulating synaptic membrane exocytosis 2.
   
 
 0.538
RRAGB
Ras-related GTP binding A.
   
 0.487
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.461
IKBKE
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.461
TBK1
TANK binding kinase 1.
    
 0.461
H3B6K7_LATCH
IKKbetaNEMObind domain-containing protein.
    
 0.461
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.457
LTA
Lymphotoxin alpha.
    
 
 0.438
NFASC
Neurofascin.
      
 0.428
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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