Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CXADRCXADR Ig-like cell adhesion molecule. (297 aa)    
Predicted Functional Partners:
APAF1
Apoptotic peptidase activating factor 1.
    
 0.699
BCL3
BCL3 transcription coactivator.
    
 0.633
DFFB
DNA fragmentation factor subunit beta.
    
 0.624
CD302
C-type lectin domain-containing protein.
      
 0.624
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.581
FAM168B
Family with sequence similarity 168 member B.
  
   
 0.544
CLDN15
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
 
 0.533
SCAF4
SR-related CTD associated factor 4.
      
 0.523
TJP1
Tight junction protein 1; Belongs to the MAGUK family.
   
 
 0.517
H3A7X3_LATCH
Ig-like domain-containing protein.
    
 0.499
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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