Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SUN2SUN domain-containing protein. (714 aa)    
Predicted Functional Partners:
FBXW11
F-box and WD repeat domain containing 11.
    
 
 0.981
SUN1
Sad1 and UNC84 domain containing 1.
  
 
0.980
CCDC155
Uncharacterized protein.
    
 0.977
H3A8H2_LATCH
Uncharacterized protein.
    
   0.961
LOC102364002
Uncharacterized protein.
    
 0.960
SYNE3
Spectrin repeat containing nuclear envelope family member 3.
    
 0.954
LOC102356178
KASH domain-containing protein.
    
 0.914
H3BBH8_LATCH
KASH domain-containing protein.
    
 0.914
LMNB2
Lamin B2; Belongs to the intermediate filament family.
    
 0.902
LMNB1
Lamin B1; Belongs to the intermediate filament family.
    
 0.876
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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