STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A6A5_LATCHSerine/threonine-protein phosphatase. (522 aa)    
Predicted Functional Partners:
LOC102360791
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.751
LOC102361286
Calmodulin 2; Belongs to the calmodulin family.
    
 0.744
WDR92
WD repeat domain 92.
   
 0.741
PPP4R2
Protein phosphatase 4, regulatory subunit 2b.
    
 0.730
DOCK10
Dedicator of cytokinesis 10; Belongs to the DOCK family.
   
  
 0.719
DOCK11
Dedicator of cytokinesis 11; Belongs to the DOCK family.
   
  
 0.717
CHP1
Calcineurin like EF-hand protein 1.
   
 0.706
TESC
Tescalcin.
   
 0.706
CIB1
Calcium and integrin binding 1.
   
 0.706
CIB4
Uncharacterized protein.
   
 0.706
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.