Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H3A6B4_LATCHUncharacterized protein. (116 aa)    
Predicted Functional Partners:
TUBGCP5
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
   
  
 0.713
CYFIP1
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
   
  
 0.633
MMGT1
Membrane magnesium transporter 1.
      
 0.547
NIPA1
NIPA magnesium transporter 1.
  
    0.519
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
      
 0.473
NIPAL1
Uncharacterized protein.
  
     0.434
IGFBP2
Insulin like growth factor binding protein 2.
      
 0.425
UNC50
Unc-50 inner nuclear membrane RNA binding protein.
      
 0.418
UXS1
UDP-glucuronate decarboxylase 1.
   
  
 0.407
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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