Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACSM3Acyl-CoA synthetase medium chain family member 3. (583 aa)    
Predicted Functional Partners:
ACADS
Acyl-CoA dehydrogenase short chain.
  
 
 0.934
ACADL
Acyl-CoA dehydrogenase long chain.
  
 
 0.819
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 
 0.742
HAO2
Hydroxyacid oxidase 2.
   
 
 0.678
CS
Citrate synthase; Belongs to the citrate synthase family.
  
 0.678
PDXDC1
Pyridoxal dependent decarboxylase domain containing 1.
      
 0.609
DECR1
2,4-dienoyl-CoA reductase 1.
  
 
 0.607
FADS1
Fatty acid desaturase 1.
   
  
 0.584
FADS2
Fatty acid desaturase 2.
   
  
 0.584
H3AHB6_LATCH
Uncharacterized protein.
   
 
 0.580
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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