Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SPNS3Sphingolipid transporter 3 (putative). (447 aa)    
Predicted Functional Partners:
MFSD13A
Major facilitator superfamily domain containing 13A.
      
 0.535
MFSD11
Major facilitator superfamily domain containing 11.
      
 0.531
BOLA1
BolA family member 1; Belongs to the BolA/IbaG family.
      
 0.524
MFSD9
Major facilitator superfamily domain containing 9.
   
  
 0.519
SVOPL
SVOP like.
      
 0.503
MFSD10
Major facilitator superfamily domain containing 10.
   
  
 0.488
MFSD3
Uncharacterized protein.
      
 0.471
SLC44A1
Solute carrier family 44 member 1; Belongs to the CTL (choline transporter-like) family.
      
 0.463
MFSD5
Major facilitator superfamily domain containing 5.
      
 0.459
SVOP
SV2 related protein.
      
 0.454
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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