STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FKBP7Peptidylprolyl isomerase. (215 aa)    
Predicted Functional Partners:
HTRA4
HtrA serine peptidase 4.
   
 
 0.666
PLEKHA2
Pleckstrin homology domain containing A2.
   
 0.636
PLEKHA3
Pleckstrin homology domain containing A3.
      
 0.620
TACC1
Transforming acidic coiled-coil containing protein 1.
    
 
 0.609
TACC2
TACC_C domain-containing protein.
    
 
 0.595
MAP1LC3C
Microtubule associated protein 1 light chain 3 gamma.
   
  
 0.574
FKBP1B
Peptidylprolyl isomerase.
  
 
 0.574
PLEKHA8
Pleckstrin homology domain containing A8.
      
 0.563
FKBP1A
Peptidylprolyl isomerase.
  
 
 0.554
PLLP
Plasmolipin.
      
 0.544
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.