STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCL2L13BCL2 like 13. (455 aa)    
Predicted Functional Partners:
GABARAPL1
GABA type A receptor associated protein like 1.
    
 0.931
GABARAPL1-2
Uncharacterized protein.
    
 0.931
GABARAPL2
GABA type A receptor associated protein like 2.
    
 0.929
FKBP8
Peptidylprolyl isomerase.
      
 0.662
NBR1
NBR1 autophagy cargo receptor.
      
 0.557
FUNDC1
FUN14 domain containing 1.
      
 0.553
AMBRA1
Autophagy and beclin 1 regulator 1.
      
 0.551
TAX1BP1
Tax1 binding protein 1.
      
 0.550
FUNDC2
FUN14 domain containing 2.
      
 0.487
LYPD6
LY6/PLAUR domain containing 6.
      
 0.485
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.