Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSMB3Proteasome subunit beta 3. (159 aa)    
Predicted Functional Partners:
PSMC4
Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.
  
 0.999
PSMB1
Proteasome subunit beta.
   
0.999
PSMA4
Proteasome subunit alpha type.
   
 0.999
PSMB6
Proteasome subunit beta.
   
 0.999
PSMB4
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.999
PSMA2
Proteasome subunit alpha type.
   
 0.999
PSMB9
Proteasome subunit beta.
   
0.999
PSMD8
Proteasome 26S subunit, non-ATPase 8.
   
 0.999
PSMA5
Proteasome subunit alpha type.
   
 0.999
PSMB2
Proteasome subunit beta.
   
 0.999
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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