STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF518AZinc finger protein 518A. (1527 aa)    
Predicted Functional Partners:
WDR5B
WD repeat domain 5B.
    
  0.507
U2SURP
U2 snRNP associated SURP domain containing.
   
  
 0.480
MCRS1
Microspherule protein 1.
    
  0.479
THOC1
THO complex 1.
      
 0.441
TMEM150B
Transmembrane protein 150B.
      
 0.426
ELFN1
Extracellular leucine rich repeat and fibronectin type III domain containing 1.
  
 
  0.404
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.