Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF518AZinc finger protein 518A. (1527 aa)    
Predicted Functional Partners:
U2SURP
U2 snRNP associated SURP domain containing.
   
 
 0.662
THOC1
THO complex 1.
      
 0.554
H3AIU2_LATCH
Zgc:163098.
   
 
 0.494
MYSM1
Myb like, SWIRM and MPN domains 1.
   
  0.455
PRPF39
Pre-mRNA processing factor 39.
      
 0.453
H3B2B0_LATCH
SH3 domain-containing protein.
    
 
 0.453
PNISR
PNN interacting serine and arginine rich protein.
   
 0.452
TMEM150B
Transmembrane protein 150B.
      
 0.439
LOC102354290
Uncharacterized protein.
    
 0.404
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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