STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYBBCytochrome b-245 beta chain. (567 aa)    
Predicted Functional Partners:
CYBA
Cytochrome b-245 alpha chain.
   
 0.985
LOC102360076
Protein kinase domain-containing protein.
     
  0.900
NAMPT
Nicotinamide phosphoribosyltransferase; Belongs to the NAPRTase family.
     
  0.900
NCF1
Neutrophil cytosolic factor 1.
   
 0.654
NOX4
NADPH oxidase 4.
  
 
0.641
H3A0M2_LATCH
Uncharacterized protein.
     
 0.597
NCF2
Neutrophil cytosolic factor 2.
   
 0.596
NOXA1
NADPH oxidase activator 1.
   
 0.596
LOC102345487
Dual oxidase 2.
 
 
 
 0.581
NOXO1
Uncharacterized protein.
   
 0.517
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.