Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CABP4Calcium binding protein 4. (240 aa)    
Predicted Functional Partners:
NR2E3
Nuclear receptor subfamily 2 group E member 3.
    
 
 0.812
LRIT3
Leucine rich repeat, Ig-like and transmembrane domains 3.
    
 0.808
IQCB1
IQ motif containing B1.
    
 0.723
PPP1R26
PPP1R26_N domain-containing protein.
      
 0.706
KCNJ13
Potassium voltage-gated channel subfamily J member 13.
      
 0.685
IMPG1
Interphotoreceptor matrix proteoglycan 1.
      
 0.670
PTRH1
Peptidyl-tRNA hydrolase 1 homolog.
      
 0.667
NYX
Nyctalopin.
    
 0.659
AIPL1
Aryl hydrocarbon receptor interacting protein like 1.
      
 0.659
TULP1
Tubby-like protein; Belongs to the TUB family.
      
 0.657
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.