STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3TC2SH3 domain and tetratricopeptide repeats 2. (1203 aa)    
Predicted Functional Partners:
FIG4
FIG4 phosphoinositide 5-phosphatase.
      
 0.895
LITAF
LITAF domain-containing protein.
   
  
 0.865
GDAP1
Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily.
      
 0.699
FGD4
FYVE, RhoGEF and PH domain containing 4.
      
 0.687
MPZ
Myelin protein zero.
      
 0.685
AP5S1
Adaptor related protein complex 5 subunit sigma 1.
      
 0.598
SH3TC1
SH3 domain and tetratricopeptide repeats 1.
      
0.590
IGHMBP2
Immunoglobulin mu DNA binding protein 2.
      
 0.555
ZBTB3
Zinc finger and BTB domain containing 3.
      
 0.552
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
      
 0.537
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.