STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A6P5_LATCHUncharacterized protein. (259 aa)    
Predicted Functional Partners:
H3AHJ3_LATCH
Uncharacterized protein.
  
     0.518
H3BA49_LATCH
Uncharacterized protein.
  
     0.493
H3A1J4_LATCH
Uncharacterized protein.
  
     0.467
H3A5N0_LATCH
Endo/exonuclease/phosphatase domain-containing protein.
  
     0.457
H3BB68_LATCH
Uncharacterized protein.
  
     0.452
H3B2K3_LATCH
Uncharacterized protein.
  
     0.447
H3ALW6_LATCH
Uncharacterized protein.
  
     0.443
H3AX49_LATCH
Uncharacterized protein.
  
     0.420
H3AJD5_LATCH
Uncharacterized protein.
  
     0.402
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.