Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3A6Q3_LATCHUncharacterized protein. (123 aa)    
Predicted Functional Partners:
GSG1L
Uncharacterized protein.
 
     0.924
NRN1
Neuritin 1.
      
 0.506
LOC102367224
Coiled-coil domain containing 114.
   
  
 0.475
CCDC63
Uncharacterized protein.
   
  
 0.475
CNIH1
Cornichon family AMPA receptor auxiliary protein 1.
      
 0.467
SYNDIG1L
Synapse differentiation inducing 1 like.
      
 0.452
MFSD10
Major facilitator superfamily domain containing 10.
      
 0.447
CPLX3
Complexin 3.
      
 0.419
H3AFN8_LATCH
Uncharacterized protein.
   
  
 0.404
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.