Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PPP1R8Protein phosphatase 1 regulatory subunit 8. (337 aa)    
Predicted Functional Partners:
DNAJC8
DnaJ heat shock protein family (Hsp40) member C8.
   
 
 0.954
TCERG1
Transcription elongation regulator 1.
   
 
  0.940
PPP1R7
Protein phosphatase 1 regulatory subunit 7.
   
 
 0.938
CDC40
Cell division cycle 40.
     
  0.936
SUGP1
SURP and G-patch domain containing 1.
     
  0.936
LOC102359594
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 
 0.879
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 
 0.879
H2ZS19_LATCH
Uncharacterized protein.
    
 
 0.856
PPP1CA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 
 0.856
PPP1CC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 
 0.856
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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