STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R8Protein phosphatase 1 regulatory subunit 8. (337 aa)    
Predicted Functional Partners:
PPP1CA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 
 0.763
PPP1CC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 
 0.763
SUOX
Sulfite oxidase.
      
 0.702
ACBD3
Acyl-CoA binding domain containing 3.
      
 0.695
LOC102359594
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 
 0.668
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 
 0.668
H3AJ81_LATCH
Serine/threonine-protein phosphatase.
   
 
 0.653
SF3B1
Splicing factor 3b subunit 1.
   
 
 0.631
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
      
 0.617
DNAJC8
DnaJ heat shock protein family (Hsp40) member C8.
   
 
 0.598
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.