STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNCGGamma-synuclein; Belongs to the synuclein family. (130 aa)    
Predicted Functional Partners:
SNCAIP
Synuclein alpha interacting protein.
    
 0.781
ELK1
ETS transcription factor ELK1.
   
 
 0.760
APBA1
Amyloid beta precursor protein binding family A member 1.
      
 0.687
LOC102365332
Apolipoprotein Ea.
    
 0.665
BABAM1
BRISC and BRCA1 A complex member 1.
      
 0.660
EXOC3L4
Uncharacterized protein.
      
 0.604
SNCB
Beta-synuclein; Belongs to the synuclein family.
   
 
0.602
KCNH6
Potassium voltage-gated channel subfamily H member 6.
      
 0.583
TCEA1
Transcription elongation factor A1.
      
 0.575
FZR1
Fizzy and cell division cycle 20 related 1.
      
 0.567
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.