Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM41ATransmembrane protein 41A. (298 aa)    
Predicted Functional Partners:
TMEM109
Uncharacterized protein.
      
 0.924
TMEM126A
Transmembrane protein 126A.
      
 0.873
SLC66A3
Solute carrier family 66 member 3.
   
  
 0.789
TMEM64
Transmembrane protein 64.
      
 0.743
OXA1L
OXA1L mitochondrial inner membrane protein.
     
 0.694
TMPPE
Transmembrane protein with metallophosphoesterase domain.
      
 0.678
UNC50
Unc-50 inner nuclear membrane RNA binding protein.
   
  
 0.646
VMP1
Vacuole membrane protein 1.
    
 
 0.644
MPC2
Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.
      
 0.641
C12orf49
Chromosome 12 open reading frame 49.
      
 0.641
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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