Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3A6T5_LATCHN-acetyltransferase domain-containing protein. (221 aa)    
Predicted Functional Partners:
LOC102364748
Zgc:152830.
     
  0.900
LAP3
Leucine aminopeptidase 3.
     
  0.900
ANPEP
Aminopeptidase.
     
  0.900
PPTC7
Protein phosphatase; Belongs to the PP2C family.
   
  
 0.762
LOC102363082
Protein phosphatase; Belongs to the PP2C family.
   
  
 0.762
H3A1V2_LATCH
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.742
BUB3
BUB3 mitotic checkpoint protein.
   
  
 0.669
H2ZUD3_LATCH
Uncharacterized protein.
   
 0.656
H2ZZR1_LATCH
Uncharacterized protein.
   
 0.656
PLXNA1
Plexin A1.
      
 0.602
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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