STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDGA2MAM domain-containing protein. (288 aa)    
Predicted Functional Partners:
H3AP17_LATCH
MAM domain containing glycosylphosphatidylinositol anchor 2a.
 
     0.920
MDGA1
MAM domain containing glycosylphosphatidylinositol anchor 1.
 
      0.900
NLGN1
Neuroligin 1.
   
 0.760
ACSF2
Acyl-CoA synthetase family member 2.
    
 
 0.665
LNX1
Ligand of numb-protein X 1.
    
 0.588
SMOC2
Uncharacterized protein.
      
 0.571
NPFFR1
Neuropeptide FF receptor 1; Belongs to the G-protein coupled receptor 1 family.
    
 0.563
SHANK2
SH3 and multiple ankyrin repeat domains 2.
      
 0.531
RAB10
RAB10, member RAS oncogene family.
     
 0.506
LOC102354107
Neuroligin 4 X-linked a.
   
  0.504
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.