STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM37Tripartite motif containing 37. (939 aa)    
Predicted Functional Partners:
TRIM23
Tripartite motif containing 23.
    
 0.637
RBCK1
IBR domain-containing protein.
    
 0.607
WDR53
WD repeat domain 53.
      
 0.597
DPP3
Dipeptidyl peptidase 3; Belongs to the peptidase M49 family.
      
 0.553
RASAL3
RAS protein activator like 3.
    
 
 0.539
BUD23
BUD23 rRNA methyltransferase and ribosome maturation factor.
      
 0.534
TRIM28
Tripartite motif containing 28.
    
 
 0.533
GTF2IRD1
GTF2I repeat domain containing 1.
      
 0.524
TRIM50
Tripartite motif containing 50.
    
 
 0.523
WDR7
WD repeat domain 7.
      
 0.516
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.