Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM128Transmembrane protein 128. (85 aa)    
Predicted Functional Partners:
RABAC1
PRA1 family protein.
    
   0.686
HID1
HID1 domain containing.
      
 0.641
NTNG2
Netrin G2.
      
 0.641
OTOP1
Otopetrin 1.
      
 0.599
ZBTB49
Zinc finger and BTB domain containing 49.
      
 0.570
LOC102364371
Otopetrin 2.
      
 0.488
LOC102364624
Otopetrin 2.
      
 0.488
HSPBP1
HSPA (Hsp70) binding protein 1.
      
 0.477
WDR1
WD repeat domain 1.
      
 0.470
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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