STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102361769Uncharacterized protein. (924 aa)    
Predicted Functional Partners:
H3A0S9_LATCH
Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
  
0.737
JUP
Junction plakoglobin.
    
 0.735
PKP2
Uncharacterized protein.
   
 0.693
PKP1
Plakophilin 1.
   
 0.671
CTNNB1
Catenin beta 1.
    
 0.567
DSP
Desmoplakin.
  
 0.485
CASP3
Caspase 3; Belongs to the peptidase C14A family.
    
 0.480
LOC102367521
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.480
LOC102361707
P53 apoptosis effector related to pmp22.
   
 
 0.477
LOC102361982
Uncharacterized protein.
   
 
 0.477
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.