STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCPEP1Carboxypeptidase; Belongs to the peptidase S10 family. (437 aa)    
Predicted Functional Partners:
SLC10A2
Solute carrier family 10 member 2.
   
  
 0.545
MAN2B2
Alpha-mannosidase.
   
  
 0.539
MAN2B1
Alpha-mannosidase.
   
  
 0.539
TPP1
Tripeptidyl peptidase 1.
   
 
 0.525
MFSD8
Major facilitator superfamily domain containing 8.
      
 0.504
LGMN
Legumain.
   
  
 0.501
NEU1
Neuraminidase 1.
   
 0.500
AHDC1
AT-hook DNA binding motif containing 1.
      
 0.465
RASL10B
RAS like family 10 member B.
    
 0.444
PSMA5
Proteasome subunit alpha type.
      
 0.438
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.