STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A711_LATCHUncharacterized protein. (446 aa)    
Predicted Functional Partners:
H3A1Q4_LATCH
Uncharacterized protein.
  
     0.531
H3A0C4_LATCH
Uncharacterized protein.
  
     0.508
H3ASZ0_LATCH
Uncharacterized protein.
  
     0.498
H3A536_LATCH
Uncharacterized protein.
  
     0.491
H3AFG3_LATCH
Dimer_Tnp_hAT domain-containing protein.
  
     0.484
H3AC63_LATCH
Uncharacterized protein.
  
     0.475
H3BBU7_LATCH
Uncharacterized protein.
  
     0.471
H3APJ3_LATCH
Dimer_Tnp_hAT domain-containing protein.
  
     0.469
H3B6H7_LATCH
Dimer_Tnp_hAT domain-containing protein.
  
     0.458
H3A6C6_LATCH
Dimer_Tnp_hAT domain-containing protein.
 
     0.448
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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