Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFAP1L1Actin filament associated protein 1 like 1. (766 aa)    
Predicted Functional Partners:
GADD45G
Growth arrest and DNA damage inducible gamma.
    
   0.937
VPS53
VPS53 subunit of GARP complex.
      
 0.913
GEMIN4
Gem nuclear organelle associated protein 4.
      
 0.886
H3AIM8_LATCH
Uncharacterized protein.
      
 0.806
SYT10
Synaptotagmin 10.
      
 0.774
GRPEL2
GrpE like 2, mitochondrial; Belongs to the GrpE family.
 
    
 0.720
TDRD5
Tudor domain containing 5.
      
 0.641
RCBTB2
RCC1 and BTB domain containing protein 2.
      
 0.598
ABLIM3
Actin binding LIM protein family member 3.
   
  
 0.594
NSA2
NSA2 ribosome biogenesis factor.
      
 0.589
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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