STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFAP1L1Actin filament associated protein 1 like 1. (766 aa)    
Predicted Functional Partners:
VPS53
VPS53 subunit of GARP complex.
      
 0.860
GEMIN4
Gem nuclear organelle associated protein 4.
      
 0.809
SYT10
Synaptotagmin 10.
      
 0.763
GRPEL2
GrpE like 2, mitochondrial; Belongs to the GrpE family.
 
    
 0.628
H3AIM8_LATCH
Uncharacterized protein.
      
 0.606
TDRD5
Tudor domain containing 5.
      
 0.564
ANXA10
Annexin A10.
      
 0.511
FKBP2
Peptidylprolyl isomerase.
      
 0.478
RCBTB2
RCC1 and BTB domain containing protein 2.
      
 0.476
GADD45G
Growth arrest and DNA damage inducible gamma.
    
   0.446
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.