STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POFUT1Protein O-fucosyltransferase 1. (329 aa)    
Predicted Functional Partners:
POFUT2
Protein O-fucosyltransferase 2.
     
 0.967
POGLUT1
Protein O-glucosyltransferase 1.
   
 
 0.740
EPB41L2
Erythrocyte membrane protein band 4.1 like 2.
      
 0.672
B4GALT5
Beta-1,4-galactosyltransferase 5.
      
 0.656
ABHD1
Abhydrolase domain containing 1.
      
 0.654
ZBTB24
Zinc finger and BTB domain containing 24.
      
 0.651
PCSK2
Proprotein convertase subtilisin/kexin type 2.
      
 0.600
AKAP7
A-kinase anchoring protein 7.
      
 0.591
EOGT
EGF domain specific O-linked N-acetylglucosamine transferase.
      
 0.583
COL21A1
Collagen, type XXI, alpha 1.
      
 0.578
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.